Cluster: HRGMv2_2415_CGC2
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2415
- CGC Family ID: CGCFAM_00199
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2415_3 | HRGMv2_2415_3_60 | 56671 | 57993 | + | 2.A.66.1.32 |
| TF | HRGMv2_2415_3 | HRGMv2_2415_3_61 | 57884 | 58807 | - | HTH_AraC | HTH_AraC |
| CAZyme | HRGMv2_2415_3 | HRGMv2_2415_3_62 | 58924 | 60993 | + | GH31_1 |
| TC | HRGMv2_2415_3 | HRGMv2_2415_3_63 | 60975 | 62177 | + | 2.A.1.60.3 |
Gene ID: HRGMv2_2415_3_60
Type: TC
Location: 56671 - 57993 (+)
Type: TC
Location: 56671 - 57993 (+)
Gene ID: HRGMv2_2415_3_61
Type: TF
Location: 57884 - 58807 (-)
Type: TF
Location: 57884 - 58807 (-)
Gene ID: HRGMv2_2415_3_62
Type: CAZyme
Location: 58924 - 60993 (+)
Type: CAZyme
Location: 58924 - 60993 (+)
Gene ID: HRGMv2_2415_3_63
Type: TC
Location: 60975 - 62177 (+)
Type: TC
Location: 60975 - 62177 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnoclostridium_B
Species
Lachnoclostridium_B stercoravium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.