Cluster: HRGMv2_2415_CGC18
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_2415
- CGC Family ID: CGCFAM_08369
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2415_51 | HRGMv2_2415_51_7 | 6039 | 6923 | - | 3.A.1.1.47 |
| TC | HRGMv2_2415_51 | HRGMv2_2415_51_8 | 6942 | 7847 | - | 3.A.1.1.18 |
| STP | HRGMv2_2415_51 | HRGMv2_2415_51_9 | 7944 | 9206 | - | SBP_bac_1 |
| CAZyme | HRGMv2_2415_51 | HRGMv2_2415_51_10 | 9241 | 10764 | - | GH136 |
| CAZyme | HRGMv2_2415_51 | HRGMv2_2415_51_11 | 10955 | 12865 | - | GH20 |
| CAZyme | HRGMv2_2415_51 | HRGMv2_2415_51_12 | 13007 | 13927 | + | GH43_24 |
| TC | HRGMv2_2415_51 | HRGMv2_2415_51_13 | 13959 | 14756 | - | 2.A.102.4.4 |
Gene ID: HRGMv2_2415_51_7
Type: TC
Location: 6039 - 6923 (-)
Type: TC
Location: 6039 - 6923 (-)
Gene ID: HRGMv2_2415_51_8
Type: TC
Location: 6942 - 7847 (-)
Type: TC
Location: 6942 - 7847 (-)
Gene ID: HRGMv2_2415_51_9
Type: STP
Location: 7944 - 9206 (-)
Type: STP
Location: 7944 - 9206 (-)
Gene ID: HRGMv2_2415_51_10
Type: CAZyme
Location: 9241 - 10764 (-)
Type: CAZyme
Location: 9241 - 10764 (-)
Gene ID: HRGMv2_2415_51_11
Type: CAZyme
Location: 10955 - 12865 (-)
Type: CAZyme
Location: 10955 - 12865 (-)
Gene ID: HRGMv2_2415_51_12
Type: CAZyme
Location: 13007 - 13927 (+)
Type: CAZyme
Location: 13007 - 13927 (+)
Gene ID: HRGMv2_2415_51_13
Type: TC
Location: 13959 - 14756 (-)
Type: TC
Location: 13959 - 14756 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnoclostridium_B
Species
Lachnoclostridium_B stercoravium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.