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Cluster: HRGMv2_2415_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2415_45 HRGMv2_2415_45_73 66361 67086 - 3.A.1.25.6
TF HRGMv2_2415_45 HRGMv2_2415_45_74 67079 68065 - HTH_AraC | HTH_AraC
TC HRGMv2_2415_45 HRGMv2_2415_45_75 68277 68921 + 2.A.115.2.3
NULL(UNKNOWN) HRGMv2_2415_45 HRGMv2_2415_45_76 68955 69878 - NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_2415_45 HRGMv2_2415_45_77 70163 70708 - Metallophos | Metallophos_2
CAZyme HRGMv2_2415_45 HRGMv2_2415_45_78 71124 72770 - CBM91 | GH43_11
CAZyme HRGMv2_2415_45 HRGMv2_2415_45_79 72786 74150 - GH30_1
CAZyme HRGMv2_2415_45 HRGMv2_2415_45_80 74171 76177 - GH42
TC HRGMv2_2415_45 HRGMv2_2415_45_81 76258 77649 - 2.A.2.3.3
CAZyme HRGMv2_2415_45 HRGMv2_2415_45_82 77678 78871 - GH5_44
Gene ID: HRGMv2_2415_45_73
Type: TC
Location: 66361 - 67086 (-)
Gene ID: HRGMv2_2415_45_74
Type: TF
Location: 67079 - 68065 (-)
Gene ID: HRGMv2_2415_45_75
Type: TC
Location: 68277 - 68921 (+)
Gene ID: HRGMv2_2415_45_76
Type:
Location: 68955 - 69878 (-)
Gene ID: HRGMv2_2415_45_77
Type: pfam
Location: 70163 - 70708 (-)
Gene ID: HRGMv2_2415_45_78
Type: CAZyme
Location: 71124 - 72770 (-)
Gene ID: HRGMv2_2415_45_79
Type: CAZyme
Location: 72786 - 74150 (-)
Gene ID: HRGMv2_2415_45_80
Type: CAZyme
Location: 74171 - 76177 (-)
Gene ID: HRGMv2_2415_45_81
Type: TC
Location: 76258 - 77649 (-)
Gene ID: HRGMv2_2415_45_82
Type: CAZyme
Location: 77678 - 78871 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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