dbCAN Logo

Cluster: HRGMv2_2412_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2412_4 HRGMv2_2412_4_31 30619 31578 + GT2
pfam HRGMv2_2412_4 HRGMv2_2412_4_32 31575 33410 + DUF6020
NULL(UNKNOWN) HRGMv2_2412_4 HRGMv2_2412_4_33 33482 36007 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2412_4 HRGMv2_2412_4_34 36011 37897 + 9.B.18.2.1
STP HRGMv2_2412_4 HRGMv2_2412_4_35 37918 39069 + Aminotran_1_2
TC HRGMv2_2412_4 HRGMv2_2412_4_36 39097 39762 + 9.B.18.1.2
STP HRGMv2_2412_4 HRGMv2_2412_4_37 39740 40702 + PALP
pfam HRGMv2_2412_4 HRGMv2_2412_4_38 40721 41704 + ATP-grasp_3 | Dala_Dala_lig_C | ATPgrasp_Ter | PylC-like_N
CAZyme HRGMv2_2412_4 HRGMv2_2412_4_39 41707 42786 + GT4
Gene ID: HRGMv2_2412_4_31
Type: CAZyme
Location: 30619 - 31578 (+)
Gene ID: HRGMv2_2412_4_32
Type: pfam
Location: 31575 - 33410 (+)
Gene ID: HRGMv2_2412_4_33
Type:
Location: 33482 - 36007 (+)
Gene ID: HRGMv2_2412_4_34
Type: TC
Location: 36011 - 37897 (+)
Gene ID: HRGMv2_2412_4_35
Type: STP
Location: 37918 - 39069 (+)
Gene ID: HRGMv2_2412_4_36
Type: TC
Location: 39097 - 39762 (+)
Gene ID: HRGMv2_2412_4_37
Type: STP
Location: 39740 - 40702 (+)
Gene ID: HRGMv2_2412_4_38
Type: pfam
Location: 40721 - 41704 (+)
Gene ID: HRGMv2_2412_4_39
Type: CAZyme
Location: 41707 - 42786 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List