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Cluster: HRGMv2_2412_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2412_3 HRGMv2_2412_3_110 123496 124644 + CE9
pfam HRGMv2_2412_3 HRGMv2_2412_3_111 124658 125815 + F_bP_aldolase
TC HRGMv2_2412_3 HRGMv2_2412_3_112 125935 126714 + 3.A.1.17.1
TC HRGMv2_2412_3 HRGMv2_2412_3_113 126690 127481 + 3.A.1.16.3
TC HRGMv2_2412_3 HRGMv2_2412_3_114 127554 128669 + 3.A.1.17.12
STP HRGMv2_2412_3 HRGMv2_2412_3_115 128785 130350 + HATPase_c
TF HRGMv2_2412_3 HRGMv2_2412_3_116 130301 130993 + GerE
TC HRGMv2_2412_3 HRGMv2_2412_3_117 131016 132956 + 1.B.52.2.1
TC HRGMv2_2412_3 HRGMv2_2412_3_118 132976 133764 + 2.A.102.4.4
Gene ID: HRGMv2_2412_3_110
Type: CAZyme
Location: 123496 - 124644 (+)
Gene ID: HRGMv2_2412_3_111
Type: pfam
Location: 124658 - 125815 (+)
Gene ID: HRGMv2_2412_3_112
Type: TC
Location: 125935 - 126714 (+)
Gene ID: HRGMv2_2412_3_113
Type: TC
Location: 126690 - 127481 (+)
Gene ID: HRGMv2_2412_3_114
Type: TC
Location: 127554 - 128669 (+)
Gene ID: HRGMv2_2412_3_115
Type: STP
Location: 128785 - 130350 (+)
Gene ID: HRGMv2_2412_3_116
Type: TF
Location: 130301 - 130993 (+)
Gene ID: HRGMv2_2412_3_117
Type: TC
Location: 131016 - 132956 (+)
Gene ID: HRGMv2_2412_3_118
Type: TC
Location: 132976 - 133764 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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