Cluster: HRGMv2_2412_CGC41
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2412
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2412_39 | HRGMv2_2412_39_1 | 429 | 1316 | - | GH17 |
| CAZyme | HRGMv2_2412_39 | HRGMv2_2412_39_2 | 1347 | 3365 | - | CBM4 | GH16_3 |
| TF | HRGMv2_2412_39 | HRGMv2_2412_39_3 | 3456 | 4463 | - | HTH_1 |
| TC | HRGMv2_2412_39 | HRGMv2_2412_39_4 | 4456 | 5271 | - | 3.A.1.24.2 |
| TC | HRGMv2_2412_39 | HRGMv2_2412_39_5 | 5399 | 7396 | - | 3.A.1.135.5 |
| TC | HRGMv2_2412_39 | HRGMv2_2412_39_6 | 7393 | 9129 | - | 3.A.1.135.5 |
Gene ID: HRGMv2_2412_39_1
Type: CAZyme
Location: 429 - 1316 (-)
Type: CAZyme
Location: 429 - 1316 (-)
Gene ID: HRGMv2_2412_39_2
Type: CAZyme
Location: 1347 - 3365 (-)
Type: CAZyme
Location: 1347 - 3365 (-)
Gene ID: HRGMv2_2412_39_3
Type: TF
Location: 3456 - 4463 (-)
Type: TF
Location: 3456 - 4463 (-)
Gene ID: HRGMv2_2412_39_4
Type: TC
Location: 4456 - 5271 (-)
Type: TC
Location: 4456 - 5271 (-)
Gene ID: HRGMv2_2412_39_5
Type: TC
Location: 5399 - 7396 (-)
Type: TC
Location: 5399 - 7396 (-)
Gene ID: HRGMv2_2412_39_6
Type: TC
Location: 7393 - 9129 (-)
Type: TC
Location: 7393 - 9129 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Suilimivivens
Species
Suilimivivens sp900554925
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.