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Cluster: HRGMv2_2412_CGC34

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2412_29 HRGMv2_2412_29_13 14561 15574 + 3.A.1.24.2
TC HRGMv2_2412_29 HRGMv2_2412_29_14 15564 16229 + 3.A.1.24.5
TC HRGMv2_2412_29 HRGMv2_2412_29_15 16246 17598 + 2.A.66.1.33
TC HRGMv2_2412_29 HRGMv2_2412_29_16 17601 18143 + 9.B.105.1.3
pfam HRGMv2_2412_29 HRGMv2_2412_29_17 18150 18911 + S4 | YlmH_RBD
TC HRGMv2_2412_29 HRGMv2_2412_29_18 18931 19851 + 2.A.69.4.2
CAZyme HRGMv2_2412_29 HRGMv2_2412_29_19 19911 20738 + CE4
pfam HRGMv2_2412_29 HRGMv2_2412_29_20 20779 21612 + NAT_N | GNAT_C
TC HRGMv2_2412_29 HRGMv2_2412_29_21 21587 23662 - 4.A.3.2.8
pfam HRGMv2_2412_29 HRGMv2_2412_29_22 23810 24583 - ABC2_membrane_6
NULL(UNKNOWN) HRGMv2_2412_29 HRGMv2_2412_29_23 24607 25410 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2412_29 HRGMv2_2412_29_24 25421 26209 - 3.A.1.141.1
Gene ID: HRGMv2_2412_29_13
Type: TC
Location: 14561 - 15574 (+)
Gene ID: HRGMv2_2412_29_14
Type: TC
Location: 15564 - 16229 (+)
Gene ID: HRGMv2_2412_29_15
Type: TC
Location: 16246 - 17598 (+)
Gene ID: HRGMv2_2412_29_16
Type: TC
Location: 17601 - 18143 (+)
Gene ID: HRGMv2_2412_29_17
Type: pfam
Location: 18150 - 18911 (+)
Gene ID: HRGMv2_2412_29_18
Type: TC
Location: 18931 - 19851 (+)
Gene ID: HRGMv2_2412_29_19
Type: CAZyme
Location: 19911 - 20738 (+)
Gene ID: HRGMv2_2412_29_20
Type: pfam
Location: 20779 - 21612 (+)
Gene ID: HRGMv2_2412_29_21
Type: TC
Location: 21587 - 23662 (-)
Gene ID: HRGMv2_2412_29_22
Type: pfam
Location: 23810 - 24583 (-)
Gene ID: HRGMv2_2412_29_23
Type:
Location: 24607 - 25410 (-)
Gene ID: HRGMv2_2412_29_24
Type: TC
Location: 25421 - 26209 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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