Cluster: HRGMv2_2412_CGC31
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2412
- CGC Family ID: CGCFAM_00115
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2412_24 | HRGMv2_2412_24_50 | 45149 | 46294 | - | GT28 |
| CAZyme | HRGMv2_2412_24 | HRGMv2_2412_24_51 | 46647 | 47471 | + | GT2 |
| NULL(UNKNOWN) | HRGMv2_2412_24 | HRGMv2_2412_24_52 | 47657 | 48097 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_2412_24 | HRGMv2_2412_24_53 | 48601 | 48930 | + | Trns_repr_metal |
| TC | HRGMv2_2412_24 | HRGMv2_2412_24_54 | 48949 | 51546 | + | 3.A.3.5.15 |
Gene ID: HRGMv2_2412_24_50
Type: CAZyme
Location: 45149 - 46294 (-)
Type: CAZyme
Location: 45149 - 46294 (-)
Gene ID: HRGMv2_2412_24_51
Type: CAZyme
Location: 46647 - 47471 (+)
Type: CAZyme
Location: 46647 - 47471 (+)
Gene ID: HRGMv2_2412_24_52
Type:
Location: 47657 - 48097 (+)
Type:
Location: 47657 - 48097 (+)
Gene ID: HRGMv2_2412_24_53
Type: pfam
Location: 48601 - 48930 (+)
Type: pfam
Location: 48601 - 48930 (+)
Gene ID: HRGMv2_2412_24_54
Type: TC
Location: 48949 - 51546 (+)
Type: TC
Location: 48949 - 51546 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Suilimivivens
Species
Suilimivivens sp900554925
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.