Cluster: HRGMv2_2412_CGC3
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate: alpha-glucan
- Genome ID: HRGMv2_2412
- CGC Family ID: CGCFAM_00037
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2412_1 | HRGMv2_2412_1_261 | 263585 | 264556 | - | 3.A.1.1.20 |
| TC | HRGMv2_2412_1 | HRGMv2_2412_1_262 | 264553 | 265488 | - | 3.A.1.1.20 |
| STP | HRGMv2_2412_1 | HRGMv2_2412_1_263 | 265505 | 267778 | - | SBP_bac_1 |
| CAZyme | HRGMv2_2412_1 | HRGMv2_2412_1_264 | 267898 | 269658 | - | CBM34 | GH13_20 |
Gene ID: HRGMv2_2412_1_261
Type: TC
Location: 263585 - 264556 (-)
Type: TC
Location: 263585 - 264556 (-)
Gene ID: HRGMv2_2412_1_262
Type: TC
Location: 264553 - 265488 (-)
Type: TC
Location: 264553 - 265488 (-)
Gene ID: HRGMv2_2412_1_263
Type: STP
Location: 265505 - 267778 (-)
Type: STP
Location: 265505 - 267778 (-)
Gene ID: HRGMv2_2412_1_264
Type: CAZyme
Location: 267898 - 269658 (-)
Type: CAZyme
Location: 267898 - 269658 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Suilimivivens
Species
Suilimivivens sp900554925
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.