Cluster: HRGMv2_2412_CGC25
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2412
- CGC Family ID: CGCFAM_00056
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2412_21 | HRGMv2_2412_21_10 | 11191 | 12750 | - | GH25 |
| STP | HRGMv2_2412_21 | HRGMv2_2412_21_11 | 12917 | 13993 | + | HATPase_c | HisKA |
| TF | HRGMv2_2412_21 | HRGMv2_2412_21_12 | 14005 | 14721 | + | Trans_reg_C |
| TC | HRGMv2_2412_21 | HRGMv2_2412_21_13 | 14741 | 15808 | - | 9.A.23.1.1 |
| TC | HRGMv2_2412_21 | HRGMv2_2412_21_14 | 15982 | 16662 | - | 9.B.20.1.3 |
Gene ID: HRGMv2_2412_21_10
Type: CAZyme
Location: 11191 - 12750 (-)
Type: CAZyme
Location: 11191 - 12750 (-)
Gene ID: HRGMv2_2412_21_11
Type: STP
Location: 12917 - 13993 (+)
Type: STP
Location: 12917 - 13993 (+)
Gene ID: HRGMv2_2412_21_12
Type: TF
Location: 14005 - 14721 (+)
Type: TF
Location: 14005 - 14721 (+)
Gene ID: HRGMv2_2412_21_13
Type: TC
Location: 14741 - 15808 (-)
Type: TC
Location: 14741 - 15808 (-)
Gene ID: HRGMv2_2412_21_14
Type: TC
Location: 15982 - 16662 (-)
Type: TC
Location: 15982 - 16662 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Suilimivivens
Species
Suilimivivens sp900554925
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.