Cluster: HRGMv2_2412_CGC19
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2412
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2412_11 | HRGMv2_2412_11_33 | 35082 | 36578 | + | 2.A.50.2.1 |
| NULL(UNKNOWN) | HRGMv2_2412_11 | HRGMv2_2412_11_34 | 36741 | 37817 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_2412_11 | HRGMv2_2412_11_35 | 37805 | 38893 | - | GT28 |
| pfam | HRGMv2_2412_11 | HRGMv2_2412_11_36 | 38910 | 39158 | - | TSCPD |
| NULL(UNKNOWN) | HRGMv2_2412_11 | HRGMv2_2412_11_37 | 39340 | 40035 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_2412_11 | HRGMv2_2412_11_38 | 40106 | 40864 | + | 9.B.169.2.2 |
Gene ID: HRGMv2_2412_11_33
Type: TC
Location: 35082 - 36578 (+)
Type: TC
Location: 35082 - 36578 (+)
Gene ID: HRGMv2_2412_11_34
Type:
Location: 36741 - 37817 (+)
Type:
Location: 36741 - 37817 (+)
Gene ID: HRGMv2_2412_11_35
Type: CAZyme
Location: 37805 - 38893 (-)
Type: CAZyme
Location: 37805 - 38893 (-)
Gene ID: HRGMv2_2412_11_36
Type: pfam
Location: 38910 - 39158 (-)
Type: pfam
Location: 38910 - 39158 (-)
Gene ID: HRGMv2_2412_11_37
Type:
Location: 39340 - 40035 (+)
Type:
Location: 39340 - 40035 (+)
Gene ID: HRGMv2_2412_11_38
Type: TC
Location: 40106 - 40864 (+)
Type: TC
Location: 40106 - 40864 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Suilimivivens
Species
Suilimivivens sp900554925
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.