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Cluster: HRGMv2_2412_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2412_9 HRGMv2_2412_9_60 71968 72684 - 3.A.1.4.10
TC HRGMv2_2412_9 HRGMv2_2412_9_61 72700 73479 - 3.A.1.4.10
TC HRGMv2_2412_9 HRGMv2_2412_9_62 73472 74476 - 3.A.1.4.1
TC HRGMv2_2412_9 HRGMv2_2412_9_63 74485 75357 - 3.A.1.4.10
TC HRGMv2_2412_9 HRGMv2_2412_9_64 75387 76514 - 3.A.1.4.10
TF HRGMv2_2412_9 HRGMv2_2412_9_65 76841 77881 + LacI
CAZyme HRGMv2_2412_9 HRGMv2_2412_9_66 78038 79792 - CBM34 | GH13_20
TC HRGMv2_2412_9 HRGMv2_2412_9_67 79789 80634 - 3.A.1.1.6
TC HRGMv2_2412_9 HRGMv2_2412_9_68 80631 81518 - 3.A.1.1.2
TC HRGMv2_2412_9 HRGMv2_2412_9_69 81592 82884 - 3.A.1.1.2
Gene ID: HRGMv2_2412_9_60
Type: TC
Location: 71968 - 72684 (-)
Gene ID: HRGMv2_2412_9_61
Type: TC
Location: 72700 - 73479 (-)
Gene ID: HRGMv2_2412_9_62
Type: TC
Location: 73472 - 74476 (-)
Gene ID: HRGMv2_2412_9_63
Type: TC
Location: 74485 - 75357 (-)
Gene ID: HRGMv2_2412_9_64
Type: TC
Location: 75387 - 76514 (-)
Gene ID: HRGMv2_2412_9_65
Type: TF
Location: 76841 - 77881 (+)
Gene ID: HRGMv2_2412_9_66
Type: CAZyme
Location: 78038 - 79792 (-)
Gene ID: HRGMv2_2412_9_67
Type: TC
Location: 79789 - 80634 (-)
Gene ID: HRGMv2_2412_9_68
Type: TC
Location: 80631 - 81518 (-)
Gene ID: HRGMv2_2412_9_69
Type: TC
Location: 81592 - 82884 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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