Cluster: HRGMv2_2412_CGC16
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2412
- CGC Family ID: CGCFAM_00046
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2412_9 | HRGMv2_2412_9_50 | 55997 | 58486 | - | GT35 |
| pfam | HRGMv2_2412_9 | HRGMv2_2412_9_51 | 58578 | 61733 | - | tRNA-synt_1 | Anticodon_1 | tRNA-synt_1g | tRNA-synt_1g | DUF5915 |
| pfam | HRGMv2_2412_9 | HRGMv2_2412_9_52 | 62175 | 65477 | - | SNF2-rel_dom | Helicase_C | SWIM | SNF2_assoc |
| TC | HRGMv2_2412_9 | HRGMv2_2412_9_53 | 65607 | 66233 | - | 2.A.115.2.14 |
| TC | HRGMv2_2412_9 | HRGMv2_2412_9_54 | 66289 | 67200 | - | 2.A.69.4.3 |
Gene ID: HRGMv2_2412_9_50
Type: CAZyme
Location: 55997 - 58486 (-)
Type: CAZyme
Location: 55997 - 58486 (-)
Gene ID: HRGMv2_2412_9_51
Type: pfam
Location: 58578 - 61733 (-)
Type: pfam
Location: 58578 - 61733 (-)
Gene ID: HRGMv2_2412_9_52
Type: pfam
Location: 62175 - 65477 (-)
Type: pfam
Location: 62175 - 65477 (-)
Gene ID: HRGMv2_2412_9_53
Type: TC
Location: 65607 - 66233 (-)
Type: TC
Location: 65607 - 66233 (-)
Gene ID: HRGMv2_2412_9_54
Type: TC
Location: 66289 - 67200 (-)
Type: TC
Location: 66289 - 67200 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Suilimivivens
Species
Suilimivivens sp900554925
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.