Cluster: HRGMv2_2412_CGC12
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2412
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2412_7 | HRGMv2_2412_7_15 | 14939 | 16270 | - | 2.A.66.1.33 |
| TF | HRGMv2_2412_7 | HRGMv2_2412_7_16 | 16399 | 17289 | + | HTH_1 |
| pfam | HRGMv2_2412_7 | HRGMv2_2412_7_17 | 17369 | 18049 | - | DUF3800 |
| CAZyme | HRGMv2_2412_7 | HRGMv2_2412_7_18 | 18216 | 19889 | - | GH13_31 |
| pfam | HRGMv2_2412_7 | HRGMv2_2412_7_19 | 20443 | 21342 | + | Epimerase |
| NULL(UNKNOWN) | HRGMv2_2412_7 | HRGMv2_2412_7_20 | 21822 | 22304 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_2412_7 | HRGMv2_2412_7_21 | 22301 | 22873 | - | 2.A.51.1.6 |
Gene ID: HRGMv2_2412_7_15
Type: TC
Location: 14939 - 16270 (-)
Type: TC
Location: 14939 - 16270 (-)
Gene ID: HRGMv2_2412_7_16
Type: TF
Location: 16399 - 17289 (+)
Type: TF
Location: 16399 - 17289 (+)
Gene ID: HRGMv2_2412_7_17
Type: pfam
Location: 17369 - 18049 (-)
Type: pfam
Location: 17369 - 18049 (-)
Gene ID: HRGMv2_2412_7_18
Type: CAZyme
Location: 18216 - 19889 (-)
Type: CAZyme
Location: 18216 - 19889 (-)
Gene ID: HRGMv2_2412_7_19
Type: pfam
Location: 20443 - 21342 (+)
Type: pfam
Location: 20443 - 21342 (+)
Gene ID: HRGMv2_2412_7_20
Type:
Location: 21822 - 22304 (-)
Type:
Location: 21822 - 22304 (-)
Gene ID: HRGMv2_2412_7_21
Type: TC
Location: 22301 - 22873 (-)
Type: TC
Location: 22301 - 22873 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Suilimivivens
Species
Suilimivivens sp900554925
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.