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Cluster: HRGMv2_2412_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2412_6 HRGMv2_2412_6_68 76973 79090 + 1.B.52.2.1
CAZyme HRGMv2_2412_6 HRGMv2_2412_6_69 79156 80913 + GH55_1
CAZyme HRGMv2_2412_6 HRGMv2_2412_6_70 80974 83706 + GH94
CAZyme HRGMv2_2412_6 HRGMv2_2412_6_71 83717 86824 + GH161
STP HRGMv2_2412_6 HRGMv2_2412_6_72 87021 88484 + SBP_bac_1
TC HRGMv2_2412_6 HRGMv2_2412_6_73 88596 89516 + 3.A.1.1.4
TC HRGMv2_2412_6 HRGMv2_2412_6_74 89520 90347 + 3.A.1.1.34
STP HRGMv2_2412_6 HRGMv2_2412_6_75 90550 92175 + SBP_bac_1
TC HRGMv2_2412_6 HRGMv2_2412_6_76 92194 93999 + 8.A.59.2.1
Gene ID: HRGMv2_2412_6_68
Type: TC
Location: 76973 - 79090 (+)
Gene ID: HRGMv2_2412_6_69
Type: CAZyme
Location: 79156 - 80913 (+)
Gene ID: HRGMv2_2412_6_70
Type: CAZyme
Location: 80974 - 83706 (+)
Gene ID: HRGMv2_2412_6_71
Type: CAZyme
Location: 83717 - 86824 (+)
Gene ID: HRGMv2_2412_6_72
Type: STP
Location: 87021 - 88484 (+)
Gene ID: HRGMv2_2412_6_73
Type: TC
Location: 88596 - 89516 (+)
Gene ID: HRGMv2_2412_6_74
Type: TC
Location: 89520 - 90347 (+)
Gene ID: HRGMv2_2412_6_75
Type: STP
Location: 90550 - 92175 (+)
Gene ID: HRGMv2_2412_6_76
Type: TC
Location: 92194 - 93999 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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