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Cluster: HRGMv2_2412_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2412_6 HRGMv2_2412_6_28 24697 26070 + 2.A.66.1.4
pfam HRGMv2_2412_6 HRGMv2_2412_6_29 26093 27196 - DNA_pol_B_exo1 | DNA_pol_B_exo2 | RNase_H_2
TC HRGMv2_2412_6 HRGMv2_2412_6_30 27393 28490 + 8.A.59.4.1
TC HRGMv2_2412_6 HRGMv2_2412_6_31 28578 29894 + 3.D.6.1.2
TC HRGMv2_2412_6 HRGMv2_2412_6_32 29909 30841 + 3.D.6.1.2
TC HRGMv2_2412_6 HRGMv2_2412_6_33 30838 31461 + 3.D.6.1.2
TC HRGMv2_2412_6 HRGMv2_2412_6_34 31448 32299 + 3.D.6.1.2
TC HRGMv2_2412_6 HRGMv2_2412_6_35 32292 32870 + 3.D.6.1.2
TC HRGMv2_2412_6 HRGMv2_2412_6_36 32882 33679 + 3.D.6.1.2
pfam HRGMv2_2412_6 HRGMv2_2412_6_37 33700 34698 - ApbE
CAZyme HRGMv2_2412_6 HRGMv2_2412_6_38 34840 35973 + GH25
Gene ID: HRGMv2_2412_6_28
Type: TC
Location: 24697 - 26070 (+)
Gene ID: HRGMv2_2412_6_29
Type: pfam
Location: 26093 - 27196 (-)
Gene ID: HRGMv2_2412_6_30
Type: TC
Location: 27393 - 28490 (+)
Gene ID: HRGMv2_2412_6_31
Type: TC
Location: 28578 - 29894 (+)
Gene ID: HRGMv2_2412_6_32
Type: TC
Location: 29909 - 30841 (+)
Gene ID: HRGMv2_2412_6_33
Type: TC
Location: 30838 - 31461 (+)
Gene ID: HRGMv2_2412_6_34
Type: TC
Location: 31448 - 32299 (+)
Gene ID: HRGMv2_2412_6_35
Type: TC
Location: 32292 - 32870 (+)
Gene ID: HRGMv2_2412_6_36
Type: TC
Location: 32882 - 33679 (+)
Gene ID: HRGMv2_2412_6_37
Type: pfam
Location: 33700 - 34698 (-)
Gene ID: HRGMv2_2412_6_38
Type: CAZyme
Location: 34840 - 35973 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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