Cluster: HRGMv2_2412_CGC1
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2412
- CGC Family ID: CGCFAM_00114
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2412_1 | HRGMv2_2412_1_36 | 36587 | 39088 | + | CBM48 | GH13_9 |
| TC | HRGMv2_2412_1 | HRGMv2_2412_1_37 | 39112 | 39966 | + | 1.A.23.2.1 |
| TC | HRGMv2_2412_1 | HRGMv2_2412_1_38 | 40106 | 40948 | - | 3.A.1.17.3 |
| TC | HRGMv2_2412_1 | HRGMv2_2412_1_39 | 40923 | 41696 | - | 3.A.1.17.8 |
Gene ID: HRGMv2_2412_1_36
Type: CAZyme
Location: 36587 - 39088 (+)
Type: CAZyme
Location: 36587 - 39088 (+)
Gene ID: HRGMv2_2412_1_37
Type: TC
Location: 39112 - 39966 (+)
Type: TC
Location: 39112 - 39966 (+)
Gene ID: HRGMv2_2412_1_38
Type: TC
Location: 40106 - 40948 (-)
Type: TC
Location: 40106 - 40948 (-)
Gene ID: HRGMv2_2412_1_39
Type: TC
Location: 40923 - 41696 (-)
Type: TC
Location: 40923 - 41696 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Suilimivivens
Species
Suilimivivens sp900554925
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.