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Cluster: HRGMv2_2407_CGC39

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2407_27 HRGMv2_2407_27_2 506 2239 + 3.A.1.106.12
TC HRGMv2_2407_27 HRGMv2_2407_27_3 2236 3900 + 3.A.1.106.11
pfam HRGMv2_2407_27 HRGMv2_2407_27_4 3912 4292 + DUF454
pfam HRGMv2_2407_27 HRGMv2_2407_27_5 4299 5012 + ATC_hydrolase
TC HRGMv2_2407_27 HRGMv2_2407_27_6 5022 5348 - 2.A.78.1.1
TC HRGMv2_2407_27 HRGMv2_2407_27_7 5345 6040 - 2.A.78.1.1
pfam HRGMv2_2407_27 HRGMv2_2407_27_8 6030 7001 - A_deaminase
CAZyme HRGMv2_2407_27 HRGMv2_2407_27_9 7030 9285 - GH36
TC HRGMv2_2407_27 HRGMv2_2407_27_10 9505 10491 + 9.B.157.1.1
sulfatase HRGMv2_2407_27 HRGMv2_2407_27_11 10515 11699 + S1_2
TC HRGMv2_2407_27 HRGMv2_2407_27_12 11711 13969 + 3.A.7.16.1
TC HRGMv2_2407_27 HRGMv2_2407_27_13 13956 14651 + 3.A.11.1.4
TC HRGMv2_2407_27 HRGMv2_2407_27_14 14778 16136 + 2.A.66.1.32
Gene ID: HRGMv2_2407_27_2
Type: TC
Location: 506 - 2239 (+)
Gene ID: HRGMv2_2407_27_3
Type: TC
Location: 2236 - 3900 (+)
Gene ID: HRGMv2_2407_27_4
Type: pfam
Location: 3912 - 4292 (+)
Gene ID: HRGMv2_2407_27_5
Type: pfam
Location: 4299 - 5012 (+)
Gene ID: HRGMv2_2407_27_6
Type: TC
Location: 5022 - 5348 (-)
Gene ID: HRGMv2_2407_27_7
Type: TC
Location: 5345 - 6040 (-)
Gene ID: HRGMv2_2407_27_8
Type: pfam
Location: 6030 - 7001 (-)
Gene ID: HRGMv2_2407_27_9
Type: CAZyme
Location: 7030 - 9285 (-)
Gene ID: HRGMv2_2407_27_10
Type: TC
Location: 9505 - 10491 (+)
Gene ID: HRGMv2_2407_27_11
Type: sulfatase
Location: 10515 - 11699 (+)
Gene ID: HRGMv2_2407_27_12
Type: TC
Location: 11711 - 13969 (+)
Gene ID: HRGMv2_2407_27_13
Type: TC
Location: 13956 - 14651 (+)
Gene ID: HRGMv2_2407_27_14
Type: TC
Location: 14778 - 16136 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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