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Cluster: HRGMv2_2407_CGC27

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2407_9 HRGMv2_2407_9_56 50724 52088 + 2.A.66.1.32
pfam HRGMv2_2407_9 HRGMv2_2407_9_57 52130 53095 - Aldose_epim
pfam HRGMv2_2407_9 HRGMv2_2407_9_58 53092 54021 - Aldose_epim
TC HRGMv2_2407_9 HRGMv2_2407_9_59 54160 54708 + 4.F.1.1.8
NULL(UNKNOWN) HRGMv2_2407_9 HRGMv2_2407_9_60 54705 55472 + NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_2407_9 HRGMv2_2407_9_61 55483 56148 + PHP
CAZyme HRGMv2_2407_9 HRGMv2_2407_9_62 56148 57470 + GH27
STP HRGMv2_2407_9 HRGMv2_2407_9_63 57567 58256 + Fer4
pfam HRGMv2_2407_9 HRGMv2_2407_9_64 58308 59303 - NMT1 | NMT1_2
TC HRGMv2_2407_9 HRGMv2_2407_9_65 59364 60953 - 3.A.1.147.6
TC HRGMv2_2407_9 HRGMv2_2407_9_66 60950 61660 - 3.A.1.147.6
TF HRGMv2_2407_9 HRGMv2_2407_9_67 61605 62192 - 0044258
TC HRGMv2_2407_9 HRGMv2_2407_9_68 62333 63694 - 2.A.66.1.28
STP HRGMv2_2407_9 HRGMv2_2407_9_69 63719 64840 - Fer4 | Fer4
TC HRGMv2_2407_9 HRGMv2_2407_9_70 64965 65738 + 3.A.1.17.13
Gene ID: HRGMv2_2407_9_56
Type: TC
Location: 50724 - 52088 (+)
Gene ID: HRGMv2_2407_9_57
Type: pfam
Location: 52130 - 53095 (-)
Gene ID: HRGMv2_2407_9_58
Type: pfam
Location: 53092 - 54021 (-)
Gene ID: HRGMv2_2407_9_59
Type: TC
Location: 54160 - 54708 (+)
Gene ID: HRGMv2_2407_9_60
Type:
Location: 54705 - 55472 (+)
Gene ID: HRGMv2_2407_9_61
Type: pfam
Location: 55483 - 56148 (+)
Gene ID: HRGMv2_2407_9_62
Type: CAZyme
Location: 56148 - 57470 (+)
Gene ID: HRGMv2_2407_9_63
Type: STP
Location: 57567 - 58256 (+)
Gene ID: HRGMv2_2407_9_64
Type: pfam
Location: 58308 - 59303 (-)
Gene ID: HRGMv2_2407_9_65
Type: TC
Location: 59364 - 60953 (-)
Gene ID: HRGMv2_2407_9_66
Type: TC
Location: 60950 - 61660 (-)
Gene ID: HRGMv2_2407_9_67
Type: TF
Location: 61605 - 62192 (-)
Gene ID: HRGMv2_2407_9_68
Type: TC
Location: 62333 - 63694 (-)
Gene ID: HRGMv2_2407_9_69
Type: STP
Location: 63719 - 64840 (-)
Gene ID: HRGMv2_2407_9_70
Type: TC
Location: 64965 - 65738 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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