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Cluster: HRGMv2_2407_CGC25

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2407_7 HRGMv2_2407_7_110 122658 123593 + 3.A.1.1.10
TC HRGMv2_2407_7 HRGMv2_2407_7_111 123605 124483 + 3.A.1.1.9
TC HRGMv2_2407_7 HRGMv2_2407_7_112 124510 126066 + 3.A.1.1.9
CAZyme HRGMv2_2407_7 HRGMv2_2407_7_113 126077 128074 + PL11
TC HRGMv2_2407_7 HRGMv2_2407_7_114 128131 129564 - 3.A.1.106.4
TC HRGMv2_2407_7 HRGMv2_2407_7_115 129793 131502 - 3.A.1.117.2
TF HRGMv2_2407_7 HRGMv2_2407_7_116 131499 131969 - MarR
pfam HRGMv2_2407_7 HRGMv2_2407_7_117 132147 133589 - tRNA-synt_2b | HGTP_anticodon | ProRS-C_1
TC HRGMv2_2407_7 HRGMv2_2407_7_118 134131 135021 + 3.A.1.1.10
TC HRGMv2_2407_7 HRGMv2_2407_7_119 135041 135919 + 3.A.1.1.10
STP HRGMv2_2407_7 HRGMv2_2407_7_120 135954 137576 + SBP_bac_1
CAZyme HRGMv2_2407_7 HRGMv2_2407_7_121 137654 139654 + GH42
Gene ID: HRGMv2_2407_7_110
Type: TC
Location: 122658 - 123593 (+)
Gene ID: HRGMv2_2407_7_111
Type: TC
Location: 123605 - 124483 (+)
Gene ID: HRGMv2_2407_7_112
Type: TC
Location: 124510 - 126066 (+)
Gene ID: HRGMv2_2407_7_113
Type: CAZyme
Location: 126077 - 128074 (+)
Gene ID: HRGMv2_2407_7_114
Type: TC
Location: 128131 - 129564 (-)
Gene ID: HRGMv2_2407_7_115
Type: TC
Location: 129793 - 131502 (-)
Gene ID: HRGMv2_2407_7_116
Type: TF
Location: 131499 - 131969 (-)
Gene ID: HRGMv2_2407_7_117
Type: pfam
Location: 132147 - 133589 (-)
Gene ID: HRGMv2_2407_7_118
Type: TC
Location: 134131 - 135021 (+)
Gene ID: HRGMv2_2407_7_119
Type: TC
Location: 135041 - 135919 (+)
Gene ID: HRGMv2_2407_7_120
Type: STP
Location: 135954 - 137576 (+)
Gene ID: HRGMv2_2407_7_121
Type: CAZyme
Location: 137654 - 139654 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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