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Cluster: HRGMv2_2407_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2407_5 HRGMv2_2407_5_33 32660 33403 - 3.A.1.3.25
TC HRGMv2_2407_5 HRGMv2_2407_5_34 33393 34187 - 3.A.1.3.15
TC HRGMv2_2407_5 HRGMv2_2407_5_35 34273 35148 - 3.A.1.3.15
TC HRGMv2_2407_5 HRGMv2_2407_5_36 35362 37206 - 3.A.16.1.2
TC HRGMv2_2407_5 HRGMv2_2407_5_37 37364 38212 + 8.A.5.1.4
NULL(UNKNOWN) HRGMv2_2407_5 HRGMv2_2407_5_38 38258 38461 - NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_2407_5 HRGMv2_2407_5_39 38518 39708 - Metallophos | Metallophos_2
CAZyme HRGMv2_2407_5 HRGMv2_2407_5_40 39737 41071 - GH28
Gene ID: HRGMv2_2407_5_33
Type: TC
Location: 32660 - 33403 (-)
Gene ID: HRGMv2_2407_5_34
Type: TC
Location: 33393 - 34187 (-)
Gene ID: HRGMv2_2407_5_35
Type: TC
Location: 34273 - 35148 (-)
Gene ID: HRGMv2_2407_5_36
Type: TC
Location: 35362 - 37206 (-)
Gene ID: HRGMv2_2407_5_37
Type: TC
Location: 37364 - 38212 (+)
Gene ID: HRGMv2_2407_5_38
Type:
Location: 38258 - 38461 (-)
Gene ID: HRGMv2_2407_5_39
Type: pfam
Location: 38518 - 39708 (-)
Gene ID: HRGMv2_2407_5_40
Type: CAZyme
Location: 39737 - 41071 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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