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Cluster: HRGMv2_2407_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2407_4 HRGMv2_2407_4_90 91952 93085 + GT28
NULL(UNKNOWN) HRGMv2_2407_4 HRGMv2_2407_4_91 93439 93675 - NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) HRGMv2_2407_4 HRGMv2_2407_4_92 93749 93946 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2407_4 HRGMv2_2407_4_93 94072 95478 - 3.A.1.31.2
TC HRGMv2_2407_4 HRGMv2_2407_4_94 95475 96206 - 3.A.1.31.2
TC HRGMv2_2407_4 HRGMv2_2407_4_95 96206 96787 - 3.A.1.31.2
TC HRGMv2_2407_4 HRGMv2_2407_4_96 96806 98539 - 3.A.1.21.1
TC HRGMv2_2407_4 HRGMv2_2407_4_97 98536 100299 - 3.A.1.21.1
TF HRGMv2_2407_4 HRGMv2_2407_4_98 100303 101280 - HTH_AraC
TC HRGMv2_2407_4 HRGMv2_2407_4_99 101540 102226 - 2.A.5.5.2
Gene ID: HRGMv2_2407_4_90
Type: CAZyme
Location: 91952 - 93085 (+)
Gene ID: HRGMv2_2407_4_91
Type:
Location: 93439 - 93675 (-)
Gene ID: HRGMv2_2407_4_92
Type:
Location: 93749 - 93946 (+)
Gene ID: HRGMv2_2407_4_93
Type: TC
Location: 94072 - 95478 (-)
Gene ID: HRGMv2_2407_4_94
Type: TC
Location: 95475 - 96206 (-)
Gene ID: HRGMv2_2407_4_95
Type: TC
Location: 96206 - 96787 (-)
Gene ID: HRGMv2_2407_4_96
Type: TC
Location: 96806 - 98539 (-)
Gene ID: HRGMv2_2407_4_97
Type: TC
Location: 98536 - 100299 (-)
Gene ID: HRGMv2_2407_4_98
Type: TF
Location: 100303 - 101280 (-)
Gene ID: HRGMv2_2407_4_99
Type: TC
Location: 101540 - 102226 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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