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Cluster: HRGMv2_2407_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2407_3 HRGMv2_2407_3_157 170119 170976 - 3.A.1.132.3
pfam HRGMv2_2407_3 HRGMv2_2407_3_158 170989 172110 - UPF0020 | THUMP | RlmL_1st
CAZyme HRGMv2_2407_3 HRGMv2_2407_3_159 172140 173222 - CE19
pfam HRGMv2_2407_3 HRGMv2_2407_3_160 173374 174447 + PFK
TC HRGMv2_2407_3 HRGMv2_2407_3_161 174499 175062 - 2.A.107.1.2
pfam HRGMv2_2407_3 HRGMv2_2407_3_162 175106 176386 - SDH_alpha
STP HRGMv2_2407_3 HRGMv2_2407_3_163 176447 177685 - Aminotran_1_2
TC HRGMv2_2407_3 HRGMv2_2407_3_164 177845 179134 + 2.A.79.1.5
TC HRGMv2_2407_3 HRGMv2_2407_3_165 179173 180540 - 2.A.66.1.32
pfam HRGMv2_2407_3 HRGMv2_2407_3_166 180557 182323 - PQQ_2
pfam HRGMv2_2407_3 HRGMv2_2407_3_167 182414 184819 - tRNA-synt_1 | tRNA-synt_1 | Anticodon_1 | tRNA-synt_1g | tRNA-synt_1g | tRNA-synt_1_2
TC HRGMv2_2407_3 HRGMv2_2407_3_168 184950 185576 - 2.A.115.2.14
Gene ID: HRGMv2_2407_3_157
Type: TC
Location: 170119 - 170976 (-)
Gene ID: HRGMv2_2407_3_158
Type: pfam
Location: 170989 - 172110 (-)
Gene ID: HRGMv2_2407_3_159
Type: CAZyme
Location: 172140 - 173222 (-)
Gene ID: HRGMv2_2407_3_160
Type: pfam
Location: 173374 - 174447 (+)
Gene ID: HRGMv2_2407_3_161
Type: TC
Location: 174499 - 175062 (-)
Gene ID: HRGMv2_2407_3_162
Type: pfam
Location: 175106 - 176386 (-)
Gene ID: HRGMv2_2407_3_163
Type: STP
Location: 176447 - 177685 (-)
Gene ID: HRGMv2_2407_3_164
Type: TC
Location: 177845 - 179134 (+)
Gene ID: HRGMv2_2407_3_165
Type: TC
Location: 179173 - 180540 (-)
Gene ID: HRGMv2_2407_3_166
Type: pfam
Location: 180557 - 182323 (-)
Gene ID: HRGMv2_2407_3_167
Type: pfam
Location: 182414 - 184819 (-)
Gene ID: HRGMv2_2407_3_168
Type: TC
Location: 184950 - 185576 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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