dbCAN Logo

Cluster: HRGMv2_2407_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2407_3 HRGMv2_2407_3_8 6468 9614 + GH106
pfam HRGMv2_2407_3 HRGMv2_2407_3_9 9635 10258 + Thy1
pfam HRGMv2_2407_3 HRGMv2_2407_3_10 10301 11971 - Prismane
TC HRGMv2_2407_3 HRGMv2_2407_3_11 12146 13513 + 2.A.66.1.33
pfam HRGMv2_2407_3 HRGMv2_2407_3_12 13595 14581 + DAPDH_C
peptidase HRGMv2_2407_3 HRGMv2_2407_3_13 14550 15077 + M95.UPW
TC HRGMv2_2407_3 HRGMv2_2407_3_14 15089 15757 - 1.C.113.1.1
pfam HRGMv2_2407_3 HRGMv2_2407_3_15 15963 18032 + UvrD-helicase | UvrD_C | UvrD_C_2
CAZyme HRGMv2_2407_3 HRGMv2_2407_3_16 18093 20099 + GH13_14
CAZyme HRGMv2_2407_3 HRGMv2_2407_3_17 20110 21591 + GH77
Gene ID: HRGMv2_2407_3_8
Type: CAZyme
Location: 6468 - 9614 (+)
Gene ID: HRGMv2_2407_3_9
Type: pfam
Location: 9635 - 10258 (+)
Gene ID: HRGMv2_2407_3_10
Type: pfam
Location: 10301 - 11971 (-)
Gene ID: HRGMv2_2407_3_11
Type: TC
Location: 12146 - 13513 (+)
Gene ID: HRGMv2_2407_3_12
Type: pfam
Location: 13595 - 14581 (+)
Gene ID: HRGMv2_2407_3_13
Type: peptidase
Location: 14550 - 15077 (+)
Gene ID: HRGMv2_2407_3_14
Type: TC
Location: 15089 - 15757 (-)
Gene ID: HRGMv2_2407_3_15
Type: pfam
Location: 15963 - 18032 (+)
Gene ID: HRGMv2_2407_3_16
Type: CAZyme
Location: 18093 - 20099 (+)
Gene ID: HRGMv2_2407_3_17
Type: CAZyme
Location: 20110 - 21591 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List