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Cluster: HRGMv2_2407_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2407_2 HRGMv2_2407_2_169 190343 191854 - CBM91 | GH43_12
pfam HRGMv2_2407_2 HRGMv2_2407_2_170 191982 193481 + FGGY_N | FGGY_C
STP HRGMv2_2407_2 HRGMv2_2407_2_171 193546 193782 + FeoA
TC HRGMv2_2407_2 HRGMv2_2407_2_172 193773 195635 + 9.A.8.1.5
peptidase HRGMv2_2407_2 HRGMv2_2407_2_173 195750 196817 + S11.004
TC HRGMv2_2407_2 HRGMv2_2407_2_174 196852 197781 + 3.A.1.131.1
pfam HRGMv2_2407_2 HRGMv2_2407_2_175 197774 199315 + ABC2_membrane_2 | ABC2_membrane_4
TC HRGMv2_2407_2 HRGMv2_2407_2_176 199374 200717 + 2.A.66.1.33
Gene ID: HRGMv2_2407_2_169
Type: CAZyme
Location: 190343 - 191854 (-)
Gene ID: HRGMv2_2407_2_170
Type: pfam
Location: 191982 - 193481 (+)
Gene ID: HRGMv2_2407_2_171
Type: STP
Location: 193546 - 193782 (+)
Gene ID: HRGMv2_2407_2_172
Type: TC
Location: 193773 - 195635 (+)
Gene ID: HRGMv2_2407_2_173
Type: peptidase
Location: 195750 - 196817 (+)
Gene ID: HRGMv2_2407_2_174
Type: TC
Location: 196852 - 197781 (+)
Gene ID: HRGMv2_2407_2_175
Type: pfam
Location: 197774 - 199315 (+)
Gene ID: HRGMv2_2407_2_176
Type: TC
Location: 199374 - 200717 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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