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Cluster: HRGMv2_2407_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2407_2 HRGMv2_2407_2_158 176890 177843 + GT2
pfam HRGMv2_2407_2 HRGMv2_2407_2_159 177870 179459 + Mannitol_dh | Mannitol_dh_C
pfam HRGMv2_2407_2 HRGMv2_2407_2_160 179517 180794 - Aminotran_1_2 | Asp_aminotransf
TC HRGMv2_2407_2 HRGMv2_2407_2_161 181040 181720 + 9.B.100.1.1
pfam HRGMv2_2407_2 HRGMv2_2407_2_162 181776 182561 + Band_7 | Zn_Ribbon_1 | Band_7_1
NULL(UNKNOWN) HRGMv2_2407_2 HRGMv2_2407_2_163 182710 183306 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2407_2 HRGMv2_2407_2_164 183726 185057 + 2.A.26.1.1
Gene ID: HRGMv2_2407_2_158
Type: CAZyme
Location: 176890 - 177843 (+)
Gene ID: HRGMv2_2407_2_159
Type: pfam
Location: 177870 - 179459 (+)
Gene ID: HRGMv2_2407_2_160
Type: pfam
Location: 179517 - 180794 (-)
Gene ID: HRGMv2_2407_2_161
Type: TC
Location: 181040 - 181720 (+)
Gene ID: HRGMv2_2407_2_162
Type: pfam
Location: 181776 - 182561 (+)
Gene ID: HRGMv2_2407_2_163
Type:
Location: 182710 - 183306 (+)
Gene ID: HRGMv2_2407_2_164
Type: TC
Location: 183726 - 185057 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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