Cluster: HRGMv2_2400_CGC23
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2400
- CGC Family ID: CGCFAM_03390
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2400_114 | HRGMv2_2400_114_3 | 1910 | 3385 | + | GH77 |
| TC | HRGMv2_2400_114 | HRGMv2_2400_114_4 | 3403 | 5139 | + | 3.A.1.135.7 |
| TC | HRGMv2_2400_114 | HRGMv2_2400_114_5 | 5136 | 6875 | + | 3.A.1.135.5 |
| TC | HRGMv2_2400_114 | HRGMv2_2400_114_6 | 7045 | 7812 | + | 3.A.1.20.2 |
Gene ID: HRGMv2_2400_114_3
Type: CAZyme
Location: 1910 - 3385 (+)
Type: CAZyme
Location: 1910 - 3385 (+)
Gene ID: HRGMv2_2400_114_4
Type: TC
Location: 3403 - 5139 (+)
Type: TC
Location: 3403 - 5139 (+)
Gene ID: HRGMv2_2400_114_5
Type: TC
Location: 5136 - 6875 (+)
Type: TC
Location: 5136 - 6875 (+)
Gene ID: HRGMv2_2400_114_6
Type: TC
Location: 7045 - 7812 (+)
Type: TC
Location: 7045 - 7812 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Ruminococcus_G
Species
Ruminococcus_G gauvreauii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.