Cluster: HRGMv2_2400_CGC2
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2400
- CGC Family ID: CGCFAM_00708
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2400_3 | HRGMv2_2400_3_31 | 39524 | 40603 | - | GT2 |
| pfam | HRGMv2_2400_3 | HRGMv2_2400_3_32 | 40777 | 41505 | + | NTP_transferase | NTP_transf_3 |
| TC | HRGMv2_2400_3 | HRGMv2_2400_3_33 | 41589 | 41861 | - | 8.A.8.1.6 |
Gene ID: HRGMv2_2400_3_31
Type: CAZyme
Location: 39524 - 40603 (-)
Type: CAZyme
Location: 39524 - 40603 (-)
Gene ID: HRGMv2_2400_3_32
Type: pfam
Location: 40777 - 41505 (+)
Type: pfam
Location: 40777 - 41505 (+)
Gene ID: HRGMv2_2400_3_33
Type: TC
Location: 41589 - 41861 (-)
Type: TC
Location: 41589 - 41861 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Ruminococcus_G
Species
Ruminococcus_G gauvreauii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.