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Cluster: HRGMv2_2400_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2400_63 HRGMv2_2400_63_3 2698 3792 - 3.A.1.1.22
CAZyme HRGMv2_2400_63 HRGMv2_2400_63_4 3805 5748 - GH127
CAZyme HRGMv2_2400_63 HRGMv2_2400_63_5 5784 7796 - GH31_4
TC HRGMv2_2400_63 HRGMv2_2400_63_6 7822 8664 - 3.A.1.1.41
TC HRGMv2_2400_63 HRGMv2_2400_63_7 8669 9580 - 3.A.1.1.25
TC HRGMv2_2400_63 HRGMv2_2400_63_8 9653 10945 - 3.A.1.1.22
TF HRGMv2_2400_63 HRGMv2_2400_63_9 11089 11826 - HTH_AraC | HTH_AraC
TC HRGMv2_2400_63 HRGMv2_2400_63_10 11830 13587 - 8.A.59.2.1
pfam HRGMv2_2400_63 HRGMv2_2400_63_11 13687 14430 - ABC2_membrane | ABC2_membrane_3
TC HRGMv2_2400_63 HRGMv2_2400_63_12 14417 15151 - 3.A.1.105.14
TF HRGMv2_2400_63 HRGMv2_2400_63_13 15223 15966 - MerR | MerR
TC HRGMv2_2400_63 HRGMv2_2400_63_14 16132 17127 - 3.A.1.2.15
TC HRGMv2_2400_63 HRGMv2_2400_63_15 17127 18632 - 3.A.1.2.20
Gene ID: HRGMv2_2400_63_3
Type: TC
Location: 2698 - 3792 (-)
Gene ID: HRGMv2_2400_63_4
Type: CAZyme
Location: 3805 - 5748 (-)
Gene ID: HRGMv2_2400_63_5
Type: CAZyme
Location: 5784 - 7796 (-)
Gene ID: HRGMv2_2400_63_6
Type: TC
Location: 7822 - 8664 (-)
Gene ID: HRGMv2_2400_63_7
Type: TC
Location: 8669 - 9580 (-)
Gene ID: HRGMv2_2400_63_8
Type: TC
Location: 9653 - 10945 (-)
Gene ID: HRGMv2_2400_63_9
Type: TF
Location: 11089 - 11826 (-)
Gene ID: HRGMv2_2400_63_10
Type: TC
Location: 11830 - 13587 (-)
Gene ID: HRGMv2_2400_63_11
Type: pfam
Location: 13687 - 14430 (-)
Gene ID: HRGMv2_2400_63_12
Type: TC
Location: 14417 - 15151 (-)
Gene ID: HRGMv2_2400_63_13
Type: TF
Location: 15223 - 15966 (-)
Gene ID: HRGMv2_2400_63_14
Type: TC
Location: 16132 - 17127 (-)
Gene ID: HRGMv2_2400_63_15
Type: TC
Location: 17127 - 18632 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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