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Cluster: HRGMv2_2400_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2400_43 HRGMv2_2400_43_4 4528 6396 + 3.A.3.6.16
pfam HRGMv2_2400_43 HRGMv2_2400_43_5 6492 7226 + Ubie_methyltran | TehB | MTS | PrmA | Methyltransf_11 | Methyltransf_12 | Methyltransf_23 | Methyltransf_25 | Methyltransf_31
TC HRGMv2_2400_43 HRGMv2_2400_43_6 7213 8202 + 3.A.1.5.11
TC HRGMv2_2400_43 HRGMv2_2400_43_7 8199 9029 + 3.A.1.5.38
TC HRGMv2_2400_43 HRGMv2_2400_43_8 9081 10643 + 3.A.1.5.20
TC HRGMv2_2400_43 HRGMv2_2400_43_9 10656 11600 + 3.A.1.5.2
TC HRGMv2_2400_43 HRGMv2_2400_43_10 11600 12526 + 3.A.1.5.29
TC HRGMv2_2400_43 HRGMv2_2400_43_11 12749 14518 + 2.A.58.2.2
TF HRGMv2_2400_43 HRGMv2_2400_43_12 14550 15227 + Trans_reg_C
STP HRGMv2_2400_43 HRGMv2_2400_43_13 15239 16585 + HATPase_c | HisKA
CAZyme HRGMv2_2400_43 HRGMv2_2400_43_14 16723 18222 - CE4
TF HRGMv2_2400_43 HRGMv2_2400_43_15 18310 18930 - GerE
pfam HRGMv2_2400_43 HRGMv2_2400_43_16 18927 20006 - HATPase_c | HisKA_3
TC HRGMv2_2400_43 HRGMv2_2400_43_17 20218 21150 + 3.A.1.105.9
Gene ID: HRGMv2_2400_43_4
Type: TC
Location: 4528 - 6396 (+)
Gene ID: HRGMv2_2400_43_5
Type: pfam
Location: 6492 - 7226 (+)
Gene ID: HRGMv2_2400_43_6
Type: TC
Location: 7213 - 8202 (+)
Gene ID: HRGMv2_2400_43_7
Type: TC
Location: 8199 - 9029 (+)
Gene ID: HRGMv2_2400_43_8
Type: TC
Location: 9081 - 10643 (+)
Gene ID: HRGMv2_2400_43_9
Type: TC
Location: 10656 - 11600 (+)
Gene ID: HRGMv2_2400_43_10
Type: TC
Location: 11600 - 12526 (+)
Gene ID: HRGMv2_2400_43_11
Type: TC
Location: 12749 - 14518 (+)
Gene ID: HRGMv2_2400_43_12
Type: TF
Location: 14550 - 15227 (+)
Gene ID: HRGMv2_2400_43_13
Type: STP
Location: 15239 - 16585 (+)
Gene ID: HRGMv2_2400_43_14
Type: CAZyme
Location: 16723 - 18222 (-)
Gene ID: HRGMv2_2400_43_15
Type: TF
Location: 18310 - 18930 (-)
Gene ID: HRGMv2_2400_43_16
Type: pfam
Location: 18927 - 20006 (-)
Gene ID: HRGMv2_2400_43_17
Type: TC
Location: 20218 - 21150 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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