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Cluster: HRGMv2_2400_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2400_33 HRGMv2_2400_33_8 5886 7127 + 3.A.1.4.8
pfam HRGMv2_2400_33 HRGMv2_2400_33_9 7117 8205 + URO-D
TC HRGMv2_2400_33 HRGMv2_2400_33_10 8242 9120 + 3.A.1.4.10
TC HRGMv2_2400_33 HRGMv2_2400_33_11 9137 10141 + 3.A.1.4.8
TC HRGMv2_2400_33 HRGMv2_2400_33_12 10134 10901 + 3.A.1.4.10
TC HRGMv2_2400_33 HRGMv2_2400_33_13 10905 11612 + 3.A.1.4.10
CAZyme HRGMv2_2400_33 HRGMv2_2400_33_14 11628 12659 + GH179
Gene ID: HRGMv2_2400_33_8
Type: TC
Location: 5886 - 7127 (+)
Gene ID: HRGMv2_2400_33_9
Type: pfam
Location: 7117 - 8205 (+)
Gene ID: HRGMv2_2400_33_10
Type: TC
Location: 8242 - 9120 (+)
Gene ID: HRGMv2_2400_33_11
Type: TC
Location: 9137 - 10141 (+)
Gene ID: HRGMv2_2400_33_12
Type: TC
Location: 10134 - 10901 (+)
Gene ID: HRGMv2_2400_33_13
Type: TC
Location: 10905 - 11612 (+)
Gene ID: HRGMv2_2400_33_14
Type: CAZyme
Location: 11628 - 12659 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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