Cluster: HRGMv2_2400_CGC11
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2400
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2400_27 | HRGMv2_2400_27_7 | 4756 | 6150 | - | 2.A.38.4.1 |
| pfam | HRGMv2_2400_27 | HRGMv2_2400_27_8 | 6125 | 7039 | - | EamA | EamA |
| pfam | HRGMv2_2400_27 | HRGMv2_2400_27_9 | 7180 | 8886 | + | ABC_ATPase | ABC_N | MRB1590_C |
| CAZyme | HRGMv2_2400_27 | HRGMv2_2400_27_10 | 8917 | 11022 | - | GH13_11 |
Gene ID: HRGMv2_2400_27_7
Type: TC
Location: 4756 - 6150 (-)
Type: TC
Location: 4756 - 6150 (-)
Gene ID: HRGMv2_2400_27_8
Type: pfam
Location: 6125 - 7039 (-)
Type: pfam
Location: 6125 - 7039 (-)
Gene ID: HRGMv2_2400_27_9
Type: pfam
Location: 7180 - 8886 (+)
Type: pfam
Location: 7180 - 8886 (+)
Gene ID: HRGMv2_2400_27_10
Type: CAZyme
Location: 8917 - 11022 (-)
Type: CAZyme
Location: 8917 - 11022 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Ruminococcus_G
Species
Ruminococcus_G gauvreauii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.