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Cluster: HRGMv2_2380_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2380_16 HRGMv2_2380_16_22 19891 21732 + 1.A.33.1.4
sulfatase HRGMv2_2380_16 HRGMv2_2380_16_23 21812 22951 + S1_7
STP HRGMv2_2380_16 HRGMv2_2380_16_24 23085 24014 + PALP
TC HRGMv2_2380_16 HRGMv2_2380_16_25 24176 25495 + 2.A.22.5.3
pfam HRGMv2_2380_16 HRGMv2_2380_16_26 25731 26504 + adh_short | Epimerase | adh_short_C2
NULL(UNKNOWN) HRGMv2_2380_16 HRGMv2_2380_16_27 26517 26855 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_2380_16 HRGMv2_2380_16_28 27174 27968 + CE4
pfam HRGMv2_2380_16 HRGMv2_2380_16_29 27998 28672 - DUF2461
STP HRGMv2_2380_16 HRGMv2_2380_16_30 28669 29529 - Sigma70_r2
TC HRGMv2_2380_16 HRGMv2_2380_16_31 29767 30657 + 2.A.7.28.11
Gene ID: HRGMv2_2380_16_22
Type: TC
Location: 19891 - 21732 (+)
Gene ID: HRGMv2_2380_16_23
Type: sulfatase
Location: 21812 - 22951 (+)
Gene ID: HRGMv2_2380_16_24
Type: STP
Location: 23085 - 24014 (+)
Gene ID: HRGMv2_2380_16_25
Type: TC
Location: 24176 - 25495 (+)
Gene ID: HRGMv2_2380_16_26
Type: pfam
Location: 25731 - 26504 (+)
Gene ID: HRGMv2_2380_16_27
Type:
Location: 26517 - 26855 (+)
Gene ID: HRGMv2_2380_16_28
Type: CAZyme
Location: 27174 - 27968 (+)
Gene ID: HRGMv2_2380_16_29
Type: pfam
Location: 27998 - 28672 (-)
Gene ID: HRGMv2_2380_16_30
Type: STP
Location: 28669 - 29529 (-)
Gene ID: HRGMv2_2380_16_31
Type: TC
Location: 29767 - 30657 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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