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Cluster: HRGMv2_2380_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2380_12 HRGMv2_2380_12_38 38308 39675 + 2.A.66.1.22
CAZyme HRGMv2_2380_12 HRGMv2_2380_12_39 39689 41161 + GH77
pfam HRGMv2_2380_12 HRGMv2_2380_12_40 41174 41833 + TENA_THI-4
TC HRGMv2_2380_12 HRGMv2_2380_12_41 41836 42594 + 3.A.1.17.8
TC HRGMv2_2380_12 HRGMv2_2380_12_42 42584 43333 + 3.A.1.17.8
STP HRGMv2_2380_12 HRGMv2_2380_12_43 43509 44045 + ANTAR
TC HRGMv2_2380_12 HRGMv2_2380_12_44 44100 44624 - 3.A.1.26.5
pfam HRGMv2_2380_12 HRGMv2_2380_12_45 44877 46244 + MatE | MatE
TC HRGMv2_2380_12 HRGMv2_2380_12_46 46282 46986 - 2.A.122.1.6
TC HRGMv2_2380_12 HRGMv2_2380_12_47 46990 47355 - 1.E.14.1.17
Gene ID: HRGMv2_2380_12_38
Type: TC
Location: 38308 - 39675 (+)
Gene ID: HRGMv2_2380_12_39
Type: CAZyme
Location: 39689 - 41161 (+)
Gene ID: HRGMv2_2380_12_40
Type: pfam
Location: 41174 - 41833 (+)
Gene ID: HRGMv2_2380_12_41
Type: TC
Location: 41836 - 42594 (+)
Gene ID: HRGMv2_2380_12_42
Type: TC
Location: 42584 - 43333 (+)
Gene ID: HRGMv2_2380_12_43
Type: STP
Location: 43509 - 44045 (+)
Gene ID: HRGMv2_2380_12_44
Type: TC
Location: 44100 - 44624 (-)
Gene ID: HRGMv2_2380_12_45
Type: pfam
Location: 44877 - 46244 (+)
Gene ID: HRGMv2_2380_12_46
Type: TC
Location: 46282 - 46986 (-)
Gene ID: HRGMv2_2380_12_47
Type: TC
Location: 46990 - 47355 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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