Cluster: HRGMv2_2380_CGC2
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2380
- CGC Family ID: CGCFAM_06808
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2380_1 | HRGMv2_2380_1_294 | 298496 | 299428 | - | 3.A.1.2.18 |
| TC | HRGMv2_2380_1 | HRGMv2_2380_1_295 | 299428 | 300531 | - | 3.A.1.2.12 |
| TC | HRGMv2_2380_1 | HRGMv2_2380_1_296 | 300521 | 302083 | - | 3.A.1.2.12 |
| pfam | HRGMv2_2380_1 | HRGMv2_2380_1_297 | 302472 | 303611 | - | Bmp | Peripla_BP_4 |
| CAZyme | HRGMv2_2380_1 | HRGMv2_2380_1_298 | 303918 | 305195 | - | GH18 |
Gene ID: HRGMv2_2380_1_294
Type: TC
Location: 298496 - 299428 (-)
Type: TC
Location: 298496 - 299428 (-)
Gene ID: HRGMv2_2380_1_295
Type: TC
Location: 299428 - 300531 (-)
Type: TC
Location: 299428 - 300531 (-)
Gene ID: HRGMv2_2380_1_296
Type: TC
Location: 300521 - 302083 (-)
Type: TC
Location: 300521 - 302083 (-)
Gene ID: HRGMv2_2380_1_297
Type: pfam
Location: 302472 - 303611 (-)
Type: pfam
Location: 302472 - 303611 (-)
Gene ID: HRGMv2_2380_1_298
Type: CAZyme
Location: 303918 - 305195 (-)
Type: CAZyme
Location: 303918 - 305195 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Anaerotignaceae
Genus
Metalachnospira
Species
Metalachnospira sp900546215
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.