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Cluster: HRGMv2_2380_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2380_21 HRGMv2_2380_21_4 2318 3319 - 2.A.120.1.7
CAZyme HRGMv2_2380_21 HRGMv2_2380_21_5 3366 4808 - GT5
peptidase HRGMv2_2380_21 HRGMv2_2380_21_6 5091 6893 + M03.UPB
pfam HRGMv2_2380_21 HRGMv2_2380_21_7 6930 8027 - LysM
TC HRGMv2_2380_21 HRGMv2_2380_21_8 8262 8939 + 3.A.1.125.3
pfam HRGMv2_2380_21 HRGMv2_2380_21_9 8942 11593 + FtsX | FtsX
TF HRGMv2_2380_21 HRGMv2_2380_21_10 11658 12320 + Trans_reg_C
TC HRGMv2_2380_21 HRGMv2_2380_21_11 12320 13222 + 2.A.21.9.2
Gene ID: HRGMv2_2380_21_4
Type: TC
Location: 2318 - 3319 (-)
Gene ID: HRGMv2_2380_21_5
Type: CAZyme
Location: 3366 - 4808 (-)
Gene ID: HRGMv2_2380_21_6
Type: peptidase
Location: 5091 - 6893 (+)
Gene ID: HRGMv2_2380_21_7
Type: pfam
Location: 6930 - 8027 (-)
Gene ID: HRGMv2_2380_21_8
Type: TC
Location: 8262 - 8939 (+)
Gene ID: HRGMv2_2380_21_9
Type: pfam
Location: 8942 - 11593 (+)
Gene ID: HRGMv2_2380_21_10
Type: TF
Location: 11658 - 12320 (+)
Gene ID: HRGMv2_2380_21_11
Type: TC
Location: 12320 - 13222 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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