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Cluster: HRGMv2_2380_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2380_1 HRGMv2_2380_1_231 245844 247424 + 2.A.66.4.5
TC HRGMv2_2380_1 HRGMv2_2380_1_232 247428 248846 + 9.B.67.1.1
CAZyme HRGMv2_2380_1 HRGMv2_2380_1_233 248848 249960 + GT4
pfam HRGMv2_2380_1 HRGMv2_2380_1_234 249971 250441 + DUF4330
pfam HRGMv2_2380_1 HRGMv2_2380_1_235 250455 250931 + DUF4330
CAZyme HRGMv2_2380_1 HRGMv2_2380_1_236 250956 253175 + GT4
CAZyme HRGMv2_2380_1 HRGMv2_2380_1_237 253196 253918 + GT26
TC HRGMv2_2380_1 HRGMv2_2380_1_238 253990 254850 + 2.A.115.1.2
TF HRGMv2_2380_1 HRGMv2_2380_1_239 255209 256300 + 0037176
TC HRGMv2_2380_1 HRGMv2_2380_1_240 256345 257028 + 3.A.1.140.1
pfam HRGMv2_2380_1 HRGMv2_2380_1_241 257018 257917 + FtsX | FtsX_ECD
pfam HRGMv2_2380_1 HRGMv2_2380_1_242 257931 258665 + SIMPL
TC HRGMv2_2380_1 HRGMv2_2380_1_243 258798 259973 + 9.B.174.1.1
Gene ID: HRGMv2_2380_1_231
Type: TC
Location: 245844 - 247424 (+)
Gene ID: HRGMv2_2380_1_232
Type: TC
Location: 247428 - 248846 (+)
Gene ID: HRGMv2_2380_1_233
Type: CAZyme
Location: 248848 - 249960 (+)
Gene ID: HRGMv2_2380_1_234
Type: pfam
Location: 249971 - 250441 (+)
Gene ID: HRGMv2_2380_1_235
Type: pfam
Location: 250455 - 250931 (+)
Gene ID: HRGMv2_2380_1_236
Type: CAZyme
Location: 250956 - 253175 (+)
Gene ID: HRGMv2_2380_1_237
Type: CAZyme
Location: 253196 - 253918 (+)
Gene ID: HRGMv2_2380_1_238
Type: TC
Location: 253990 - 254850 (+)
Gene ID: HRGMv2_2380_1_239
Type: TF
Location: 255209 - 256300 (+)
Gene ID: HRGMv2_2380_1_240
Type: TC
Location: 256345 - 257028 (+)
Gene ID: HRGMv2_2380_1_241
Type: pfam
Location: 257018 - 257917 (+)
Gene ID: HRGMv2_2380_1_242
Type: pfam
Location: 257931 - 258665 (+)
Gene ID: HRGMv2_2380_1_243
Type: TC
Location: 258798 - 259973 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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