Cluster: HRGMv2_2379_CGC6
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2379
- CGC Family ID: CGCFAM_00765
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2379_14 | HRGMv2_2379_14_8 | 7629 | 9056 | - | AA7 |
| pfam | HRGMv2_2379_14 | HRGMv2_2379_14_9 | 9082 | 10368 | - | Lar_N | LarA_C |
| TC | HRGMv2_2379_14 | HRGMv2_2379_14_10 | 10421 | 11974 | - | 2.A.14.1.2 |
| TF | HRGMv2_2379_14 | HRGMv2_2379_14_11 | 12348 | 12758 | - | FUR |
| CAZyme | HRGMv2_2379_14 | HRGMv2_2379_14_12 | 12954 | 14357 | - | AA7 |
Gene ID: HRGMv2_2379_14_8
Type: CAZyme
Location: 7629 - 9056 (-)
Type: CAZyme
Location: 7629 - 9056 (-)
Gene ID: HRGMv2_2379_14_9
Type: pfam
Location: 9082 - 10368 (-)
Type: pfam
Location: 9082 - 10368 (-)
Gene ID: HRGMv2_2379_14_10
Type: TC
Location: 10421 - 11974 (-)
Type: TC
Location: 10421 - 11974 (-)
Gene ID: HRGMv2_2379_14_11
Type: TF
Location: 12348 - 12758 (-)
Type: TF
Location: 12348 - 12758 (-)
Gene ID: HRGMv2_2379_14_12
Type: CAZyme
Location: 12954 - 14357 (-)
Type: CAZyme
Location: 12954 - 14357 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Anaerostipes
Species
Anaerostipes sp018918155
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2379_14_8 | vegan > omnivore | 1.33315 | 0.00433 |
| HRGMv2_2379_14_10 | vegan > omnivore | 2.17687 | 0.00433 |
| HRGMv2_2379_14_12 | vegan > omnivore | 1.05270 | 0.00433 |