Cluster: HRGMv2_2379_CGC4
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2379
- CGC Family ID: CGCFAM_00131
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2379_12 | HRGMv2_2379_12_22 | 17099 | 17584 | - | 4.A.1.1.11 |
| CAZyme | HRGMv2_2379_12 | HRGMv2_2379_12_23 | 17627 | 18961 | - | GH4 |
| TC | HRGMv2_2379_12 | HRGMv2_2379_12_24 | 18992 | 20560 | - | 4.A.1.1.8 |
Gene ID: HRGMv2_2379_12_22
Type: TC
Location: 17099 - 17584 (-)
Type: TC
Location: 17099 - 17584 (-)
Gene ID: HRGMv2_2379_12_23
Type: CAZyme
Location: 17627 - 18961 (-)
Type: CAZyme
Location: 17627 - 18961 (-)
Gene ID: HRGMv2_2379_12_24
Type: TC
Location: 18992 - 20560 (-)
Type: TC
Location: 18992 - 20560 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Anaerostipes
Species
Anaerostipes sp018918155
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2379_12_24 | vegan > omnivore | 1.74948 | 0.00433 |