Cluster: HRGMv2_2379_CGC24
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2379
- CGC Family ID: CGCFAM_00054
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2379_103 | HRGMv2_2379_103_4 | 1934 | 2515 | - | 2.A.115.2.12 |
| CAZyme | HRGMv2_2379_103 | HRGMv2_2379_103_5 | 2577 | 4805 | - | GH36 |
| TC | HRGMv2_2379_103 | HRGMv2_2379_103_6 | 4832 | 6190 | - | 2.A.2.1.1 |
Gene ID: HRGMv2_2379_103_4
Type: TC
Location: 1934 - 2515 (-)
Type: TC
Location: 1934 - 2515 (-)
Gene ID: HRGMv2_2379_103_5
Type: CAZyme
Location: 2577 - 4805 (-)
Type: CAZyme
Location: 2577 - 4805 (-)
Gene ID: HRGMv2_2379_103_6
Type: TC
Location: 4832 - 6190 (-)
Type: TC
Location: 4832 - 6190 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Anaerostipes
Species
Anaerostipes sp018918155
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2379_103_6 | vegan > omnivore | 1.52657 | 0.00433 |