Cluster: HRGMv2_2379_CGC21
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2379
- CGC Family ID: CGCFAM_05859
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2379_69 | HRGMv2_2379_69_3 | 1762 | 2568 | - | CE4 |
| NULL(UNKNOWN) | HRGMv2_2379_69 | HRGMv2_2379_69_4 | 2621 | 3310 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_2379_69 | HRGMv2_2379_69_5 | 3386 | 4081 | - | PNP_UDP_1 |
| TC | HRGMv2_2379_69 | HRGMv2_2379_69_6 | 4132 | 4563 | - | 4.A.2.1.19 |
| pfam | HRGMv2_2379_69 | HRGMv2_2379_69_7 | 4736 | 4999 | + | TSCPD |
| CAZyme | HRGMv2_2379_69 | HRGMv2_2379_69_8 | 4999 | 6072 | + | GT28 |
Gene ID: HRGMv2_2379_69_3
Type: CAZyme
Location: 1762 - 2568 (-)
Type: CAZyme
Location: 1762 - 2568 (-)
Gene ID: HRGMv2_2379_69_4
Type:
Location: 2621 - 3310 (-)
Type:
Location: 2621 - 3310 (-)
Gene ID: HRGMv2_2379_69_5
Type: pfam
Location: 3386 - 4081 (-)
Type: pfam
Location: 3386 - 4081 (-)
Gene ID: HRGMv2_2379_69_6
Type: TC
Location: 4132 - 4563 (-)
Type: TC
Location: 4132 - 4563 (-)
Gene ID: HRGMv2_2379_69_7
Type: pfam
Location: 4736 - 4999 (+)
Type: pfam
Location: 4736 - 4999 (+)
Gene ID: HRGMv2_2379_69_8
Type: CAZyme
Location: 4999 - 6072 (+)
Type: CAZyme
Location: 4999 - 6072 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Anaerostipes
Species
Anaerostipes sp018918155
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2379_69_8 | vegan > omnivore | 2.07865 | 0.00433 |