dbCAN Logo

Cluster: HRGMv2_2379_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2379_7 HRGMv2_2379_7_24 18629 21250 - 9.B.144.1.5
CAZyme HRGMv2_2379_7 HRGMv2_2379_7_25 21240 21956 - GT2
pfam HRGMv2_2379_7 HRGMv2_2379_7_26 22142 23476 + ELFV_dehydrog | ELFV_dehydrog_N
TC HRGMv2_2379_7 HRGMv2_2379_7_27 23578 24921 - 2.A.66.1.33
NULL(UNKNOWN) HRGMv2_2379_7 HRGMv2_2379_7_28 24918 25151 - NULL(UNKNOWN)
[View Structural Homologs]
TF HRGMv2_2379_7 HRGMv2_2379_7_29 25251 26120 - HTH_1
TC HRGMv2_2379_7 HRGMv2_2379_7_30 26664 27290 - 3.A.2.3.2
TC HRGMv2_2379_7 HRGMv2_2379_7_31 27303 28688 - 3.A.2.3.3
TC HRGMv2_2379_7 HRGMv2_2379_7_32 28700 30466 - 3.A.2.3.2
Gene ID: HRGMv2_2379_7_24
Type: TC
Location: 18629 - 21250 (-)
Gene ID: HRGMv2_2379_7_25
Type: CAZyme
Location: 21240 - 21956 (-)
Gene ID: HRGMv2_2379_7_26
Type: pfam
Location: 22142 - 23476 (+)
Gene ID: HRGMv2_2379_7_27
Type: TC
Location: 23578 - 24921 (-)
Gene ID: HRGMv2_2379_7_28
Type:
Location: 24918 - 25151 (-)
Gene ID: HRGMv2_2379_7_29
Type: TF
Location: 25251 - 26120 (-)
Gene ID: HRGMv2_2379_7_30
Type: TC
Location: 26664 - 27290 (-)
Gene ID: HRGMv2_2379_7_31
Type: TC
Location: 27303 - 28688 (-)
Gene ID: HRGMv2_2379_7_32
Type: TC
Location: 28700 - 30466 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List