Cluster: HRGMv2_2379_CGC19
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2379
- CGC Family ID: CGCFAM_03228
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2379_53 | HRGMv2_2379_53_7 | 5342 | 7237 | + | 3.A.1.120.6 |
| CAZyme | HRGMv2_2379_53 | HRGMv2_2379_53_8 | 7272 | 8288 | + | GT2 |
| pfam | HRGMv2_2379_53 | HRGMv2_2379_53_9 | 8380 | 8970 | - | Cytidylate_kin2 |
| TC | HRGMv2_2379_53 | HRGMv2_2379_53_10 | 9015 | 9707 | - | 2.A.122.1.4 |
| TC | HRGMv2_2379_53 | HRGMv2_2379_53_11 | 9700 | 10059 | - | 1.E.14.1.1 |
Gene ID: HRGMv2_2379_53_7
Type: TC
Location: 5342 - 7237 (+)
Type: TC
Location: 5342 - 7237 (+)
Gene ID: HRGMv2_2379_53_8
Type: CAZyme
Location: 7272 - 8288 (+)
Type: CAZyme
Location: 7272 - 8288 (+)
Gene ID: HRGMv2_2379_53_9
Type: pfam
Location: 8380 - 8970 (-)
Type: pfam
Location: 8380 - 8970 (-)
Gene ID: HRGMv2_2379_53_10
Type: TC
Location: 9015 - 9707 (-)
Type: TC
Location: 9015 - 9707 (-)
Gene ID: HRGMv2_2379_53_11
Type: TC
Location: 9700 - 10059 (-)
Type: TC
Location: 9700 - 10059 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Anaerostipes
Species
Anaerostipes sp018918155
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.