dbCAN Logo

Cluster: HRGMv2_2379_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2379_40 HRGMv2_2379_40_6 6155 7621 - GH32
TC HRGMv2_2379_40 HRGMv2_2379_40_7 7650 9587 - 4.A.1.2.12
TF HRGMv2_2379_40 HRGMv2_2379_40_8 9777 10766 - LacI
pfam HRGMv2_2379_40 HRGMv2_2379_40_9 10940 11683 + Rotamase | Rotamase_2 | Rotamase_3
TC HRGMv2_2379_40 HRGMv2_2379_40_10 11728 13062 - 1.C.105.2.8
pfam HRGMv2_2379_40 HRGMv2_2379_40_11 13066 14100 - Metallophos | Metallophos_2
pfam HRGMv2_2379_40 HRGMv2_2379_40_12 14171 14818 - ABC2_membrane_5
TC HRGMv2_2379_40 HRGMv2_2379_40_13 14815 15675 - 3.A.1.149.1
Gene ID: HRGMv2_2379_40_6
Type: CAZyme
Location: 6155 - 7621 (-)
Gene ID: HRGMv2_2379_40_7
Type: TC
Location: 7650 - 9587 (-)
Gene ID: HRGMv2_2379_40_8
Type: TF
Location: 9777 - 10766 (-)
Gene ID: HRGMv2_2379_40_9
Type: pfam
Location: 10940 - 11683 (+)
Gene ID: HRGMv2_2379_40_10
Type: TC
Location: 11728 - 13062 (-)
Gene ID: HRGMv2_2379_40_11
Type: pfam
Location: 13066 - 14100 (-)
Gene ID: HRGMv2_2379_40_12
Type: pfam
Location: 14171 - 14818 (-)
Gene ID: HRGMv2_2379_40_13
Type: TC
Location: 14815 - 15675 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_2379_40_7 vegan > omnivore 2.38930 0.00433
HRGMv2_2379_40_8 vegan > omnivore 3.06897 0.00433
HRGMv2_2379_40_9 vegan > omnivore 16.98951 0.00433

🧭 Explore Read Mapping of CGC

← Back to Cluster List