Cluster: HRGMv2_2379_CGC14
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2379
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2379_39 | HRGMv2_2379_39_9 | 6003 | 7829 | + | GH23 |
| pfam | HRGMv2_2379_39 | HRGMv2_2379_39_10 | 7841 | 8464 | + | DUF5038 |
| TC | HRGMv2_2379_39 | HRGMv2_2379_39_11 | 8461 | 11643 | + | 3.A.7.11.1 |
Gene ID: HRGMv2_2379_39_9
Type: CAZyme
Location: 6003 - 7829 (+)
Type: CAZyme
Location: 6003 - 7829 (+)
Gene ID: HRGMv2_2379_39_10
Type: pfam
Location: 7841 - 8464 (+)
Type: pfam
Location: 7841 - 8464 (+)
Gene ID: HRGMv2_2379_39_11
Type: TC
Location: 8461 - 11643 (+)
Type: TC
Location: 8461 - 11643 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Anaerostipes
Species
Anaerostipes sp018918155
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2379_39_9 | vegan > omnivore | 1.25313 | 0.00433 |
| HRGMv2_2379_39_10 | vegan > omnivore | 1.39365 | 0.00433 |