Cluster: HRGMv2_2379_CGC11
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2379
- CGC Family ID: CGCFAM_02798
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2379_25 | HRGMv2_2379_25_20 | 16137 | 17573 | - | GH73 |
| TC | HRGMv2_2379_25 | HRGMv2_2379_25_21 | 17811 | 18614 | + | 3.A.1.3.27 |
| TC | HRGMv2_2379_25 | HRGMv2_2379_25_22 | 18724 | 19380 | + | 3.A.1.3.5 |
| TC | HRGMv2_2379_25 | HRGMv2_2379_25_23 | 19392 | 20150 | + | 3.A.1.3.10 |
Gene ID: HRGMv2_2379_25_20
Type: CAZyme
Location: 16137 - 17573 (-)
Type: CAZyme
Location: 16137 - 17573 (-)
Gene ID: HRGMv2_2379_25_21
Type: TC
Location: 17811 - 18614 (+)
Type: TC
Location: 17811 - 18614 (+)
Gene ID: HRGMv2_2379_25_22
Type: TC
Location: 18724 - 19380 (+)
Type: TC
Location: 18724 - 19380 (+)
Gene ID: HRGMv2_2379_25_23
Type: TC
Location: 19392 - 20150 (+)
Type: TC
Location: 19392 - 20150 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Anaerostipes
Species
Anaerostipes sp018918155
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2379_25_22 | vegan > omnivore | 2.30110 | 0.00433 |