Cluster: HRGMv2_2379_CGC1
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2379
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2379_4 | HRGMv2_2379_4_11 | 10447 | 12018 | + | CBM50 |
| pfam | HRGMv2_2379_4 | HRGMv2_2379_4_12 | 12124 | 13002 | + | GHMP_kinases_N | GHMP_kinases_C |
| TF | HRGMv2_2379_4 | HRGMv2_2379_4_13 | 13047 | 13721 | + | GntR |
| TC | HRGMv2_2379_4 | HRGMv2_2379_4_14 | 13847 | 15358 | + | 9.A.11.1.2 |
Gene ID: HRGMv2_2379_4_11
Type: CAZyme
Location: 10447 - 12018 (+)
Type: CAZyme
Location: 10447 - 12018 (+)
Gene ID: HRGMv2_2379_4_12
Type: pfam
Location: 12124 - 13002 (+)
Type: pfam
Location: 12124 - 13002 (+)
Gene ID: HRGMv2_2379_4_13
Type: TF
Location: 13047 - 13721 (+)
Type: TF
Location: 13047 - 13721 (+)
Gene ID: HRGMv2_2379_4_14
Type: TC
Location: 13847 - 15358 (+)
Type: TC
Location: 13847 - 15358 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Anaerostipes
Species
Anaerostipes sp018918155
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.