Cluster: HRGMv2_2363_CGC9
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2363
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2363_6 | HRGMv2_2363_6_31 | 33090 | 34187 | - | 2.A.56.1.3 |
| TC | HRGMv2_2363_6 | HRGMv2_2363_6_32 | 34242 | 35540 | - | 2.A.56.1.1 |
| pfam | HRGMv2_2363_6 | HRGMv2_2363_6_33 | 35537 | 36019 | - | DctQ |
| TF | HRGMv2_2363_6 | HRGMv2_2363_6_34 | 36240 | 37214 | + | HTH_1 |
| CAZyme | HRGMv2_2363_6 | HRGMv2_2363_6_35 | 37276 | 38718 | - | CE4 |
Gene ID: HRGMv2_2363_6_31
Type: TC
Location: 33090 - 34187 (-)
Type: TC
Location: 33090 - 34187 (-)
Gene ID: HRGMv2_2363_6_32
Type: TC
Location: 34242 - 35540 (-)
Type: TC
Location: 34242 - 35540 (-)
Gene ID: HRGMv2_2363_6_33
Type: pfam
Location: 35537 - 36019 (-)
Type: pfam
Location: 35537 - 36019 (-)
Gene ID: HRGMv2_2363_6_34
Type: TF
Location: 36240 - 37214 (+)
Type: TF
Location: 36240 - 37214 (+)
Gene ID: HRGMv2_2363_6_35
Type: CAZyme
Location: 37276 - 38718 (-)
Type: CAZyme
Location: 37276 - 38718 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Brotaphodocola
Species
Brotaphodocola sp003506385
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2363_6_31 | vegetarian > vegan | 1.48368 | 0.04047 |