Cluster: HRGMv2_2363_CGC8
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2363
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2363_5 | HRGMv2_2363_5_29 | 34620 | 36875 | - | GH73 |
| TC | HRGMv2_2363_5 | HRGMv2_2363_5_30 | 37124 | 38536 | - | 3.B.1.1.6 |
| TC | HRGMv2_2363_5 | HRGMv2_2363_5_31 | 38600 | 39748 | - | 3.B.1.1.3 |
| TC | HRGMv2_2363_5 | HRGMv2_2363_5_32 | 39788 | 40153 | - | 3.B.1.1.2 |
| pfam | HRGMv2_2363_5 | HRGMv2_2363_5_33 | 40175 | 40951 | - | OAD_gamma |
| TC | HRGMv2_2363_5 | HRGMv2_2363_5_34 | 40969 | 42417 | - | 3.B.1.1.5 |
Gene ID: HRGMv2_2363_5_29
Type: CAZyme
Location: 34620 - 36875 (-)
Type: CAZyme
Location: 34620 - 36875 (-)
Gene ID: HRGMv2_2363_5_30
Type: TC
Location: 37124 - 38536 (-)
Type: TC
Location: 37124 - 38536 (-)
Gene ID: HRGMv2_2363_5_31
Type: TC
Location: 38600 - 39748 (-)
Type: TC
Location: 38600 - 39748 (-)
Gene ID: HRGMv2_2363_5_32
Type: TC
Location: 39788 - 40153 (-)
Type: TC
Location: 39788 - 40153 (-)
Gene ID: HRGMv2_2363_5_33
Type: pfam
Location: 40175 - 40951 (-)
Type: pfam
Location: 40175 - 40951 (-)
Gene ID: HRGMv2_2363_5_34
Type: TC
Location: 40969 - 42417 (-)
Type: TC
Location: 40969 - 42417 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Brotaphodocola
Species
Brotaphodocola sp003506385
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.