Cluster: HRGMv2_2363_CGC5
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 4
- Substrate:
- Genome ID: HRGMv2_2363
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2363_4 | HRGMv2_2363_4_24 | 34243 | 36054 | - | GT2 |
| TC | HRGMv2_2363_4 | HRGMv2_2363_4_25 | 36067 | 36813 | - | 3.A.1.103.1 |
| TC | HRGMv2_2363_4 | HRGMv2_2363_4_26 | 36837 | 37625 | - | 3.A.1.103.4 |
| CAZyme | HRGMv2_2363_4 | HRGMv2_2363_4_27 | 37650 | 38693 | - | GT2 |
| CAZyme | HRGMv2_2363_4 | HRGMv2_2363_4_28 | 38716 | 39747 | - | GT2 |
| TC | HRGMv2_2363_4 | HRGMv2_2363_4_29 | 39749 | 41134 | - | 9.B.18.1.3 |
| CAZyme | HRGMv2_2363_4 | HRGMv2_2363_4_30 | 41124 | 41975 | - | GT2 |
Gene ID: HRGMv2_2363_4_24
Type: CAZyme
Location: 34243 - 36054 (-)
Type: CAZyme
Location: 34243 - 36054 (-)
Gene ID: HRGMv2_2363_4_25
Type: TC
Location: 36067 - 36813 (-)
Type: TC
Location: 36067 - 36813 (-)
Gene ID: HRGMv2_2363_4_26
Type: TC
Location: 36837 - 37625 (-)
Type: TC
Location: 36837 - 37625 (-)
Gene ID: HRGMv2_2363_4_27
Type: CAZyme
Location: 37650 - 38693 (-)
Type: CAZyme
Location: 37650 - 38693 (-)
Gene ID: HRGMv2_2363_4_28
Type: CAZyme
Location: 38716 - 39747 (-)
Type: CAZyme
Location: 38716 - 39747 (-)
Gene ID: HRGMv2_2363_4_29
Type: TC
Location: 39749 - 41134 (-)
Type: TC
Location: 39749 - 41134 (-)
Gene ID: HRGMv2_2363_4_30
Type: CAZyme
Location: 41124 - 41975 (-)
Type: CAZyme
Location: 41124 - 41975 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Brotaphodocola
Species
Brotaphodocola sp003506385
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.